BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021G10SP1|AL427817
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1307 1847 0.0
>3x_Contig1307
Length = 7280
Score = 1847 bits (926), Expect = 0.0
Identities = 960/974 (98%), Gaps = 2/974 (0%)
Strand = Plus / Minus
Query: 1 gatctgaacattgtgcgtgaaagagatacggtcctagctttcttttatctactactttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 gatctgaacattgtgcgtgaaagagatacggtcctagctttcttttatctactactttgt 4442
Query: 61 gctgtccaggttcctttagacgtaaagaaatctaccaacttgttagcagtgtataacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 gctgtccaggttcctttagacgtaaagaaatctaccaacttgttagcagtgtataacaca 4382
Query: 121 caaggcaaacttgggataagtgttttgaactttctattgtagatcgagcttccatcgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 caaggcaaacttgggataagtgttttgaactttctattgtagatcgagcttccatcgtca 4322
Query: 181 atgatttt-catttcattttttttttcatgtcaaaagaacgactaataagcatatgtttc 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 atgatttttcatttcattttttttttcatgtcaaaagaacgactaataagcatatgtttc 4262
Query: 240 aagtgtcgcctgavaattaaattatttttcaacaaatttccctttgattgttcgatagat 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 aagtgtcgcctgaaaattaaattatttttcaacaaatttccctttgattgttcgatagat 4202
Query: 300 taavatcgagaacaggattttcaactttcaatatgcattgagactagtgttggccgggaa 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 taaaatcgagaacaggattttcaactttcaatatgcattgagactagtgttggccgggaa 4142
Query: 360 caaatgaagtgattgttagtttacagcgtgacatagcagcggtcataaggrgaatttagt 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4141 caaatgaagtgattgttagtttacagcgtgacatagcagcggtcataaggagaatttagt 4082
Query: 420 gcattccagaatcttatgagcaagacgtgtaamacatgtttttatagtaaaagtgacaat 479
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4081 gcattccagaatcttatgagcaagacgtgtaaaacatgtttttatagtaaaagtgacaat 4022
Query: 480 acaaagaacttggtttgtggtgtaagtctttattctggaagaagcgatactaamagttac 539
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 4021 acaaagaacttggtttgtggtttaagtctttattctggaagaagcgatactaaaagttac 3962
Query: 540 gatctaagatgatacgaaaagctgtgcctgacttttctgccatgatcaasagctgtgtac 599
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3961 gatctaagatgatacgaaaagctgtgcctgacttttctgccatgatcaaaagctgtgtac 3902
Query: 600 gaggcgaattttcagatgtcttgacagaactacgaagcacgccgagggattgcatgaata 659
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 3901 gaggcgaattttcagatgtattgaaagaactacgaagcacgccgagggattgcatgaata 3842
Query: 660 ggacatttttacagttttatttgggtcaatctacgaaatatgcacattggccttmaattt 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3841 ggacatttttacagttttatttgggtcaatctacgaaatatgcacattggccttcaattt 3782
Query: 720 cttttatttggaaccgatttgtggtgcgtagggatcttcttgttgtg-aamcgagtgttc 778
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 3781 cttttatttggaaccgatttgtggtgcgtagggatcttcttgttgtgaaaccgagtgttc 3722
Query: 779 tagccgatatagcaaagatttcaatgcacaatggaaaatatggcttcacagaaacgttac 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 tagccgatatagcaaagatttcaatgcacaatggaaaatatggcttcacagaaacgttac 3662
Query: 839 ttaaacattataatcggtattatgcatctcataccggtgttcgatgggatgggtataggt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 ttaaacattataatcggtattatgcatctcataccggtgttcgatgggatgggtataggt 3602
Query: 899 acatgttgttaaatgcgcatattgaaatgtacgctaagaaacctaacagagaagttaact 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 acatgttgttaaatgcgcatattgaaatgtacgctaagaaacctaacagagaagttaact 3542
Query: 959 ttaagraaaaatgg 972
||||| ||||||||
Sbjct: 3541 ttaagaaaaaatgg 3528
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8054
Number of Sequences: 1807
Number of extensions: 8054
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)